News
SABIO-RK in de.NBI course
01-31-2018
de.NBI course 'Tools for systems biology modeling and data management'
Date: April 24th-26th, 2018
Location: Magdeburg, Germany 
Website: Tools for systems biology modeling and data management
New SABIO-RK paper
11-06-2017
SABIO-RK update paper published in Database issue of Nucleic Acid Research:
https://doi.org/10.1093/nar/gkx1065
More export formats supported
10-12-2017
Besides SBML, SBBioPax and spreadsheet export, SABIO-RK supports now the export of kinetics data in a variety of additional formats including e.g. Matlab, BioPAX level 2 and level 3, DOT, Octave, XPP and SBGNML.
SABIO-RK in MetaNetX
09-26-2017
MetaNetX integrated SABIO-RK and implemented cross-references to compounds and reactions in SABIO-RK.
MetaNetX is an online platform for accessing, analyzing and manipulating genome-scale metabolic networks as well as biochemical pathways.
SABIO-RK at ICSB2017
05-29-2017
COMBINE - de.NBI Tutorial: Modelling and Simulation Tools in Systems Biology
This tutorial workshop is a satellite of the 18th International Conference on Systems Biology (ICSB).
Participants will learn how to set up computer models of biological systems (e.g. metabolic or
signalling networks) using experimental kinetic data and how to simulate them in different systems
biology platforms. Hands-on sessions, lectures and software demonstrations will be included,
providing attendees with the necessary skills to access experime
ntal kinetics data from available
resources, to assemble computer models with these data, and finally to simulate the generated models
using simulation tools. Also handling and exchange of biological models based on existing community
standards will be dem
onstrated along with the basic principles of the underlying standard formats.
Dates: Sunday, August 6th, 2017
(9:00 - 18:00)
Location: BLacksburg, Virginia (USA)
Website: http://co.mbine.org/events/tutorial2017
SABIO-RK Training Event
04-06-2017
SABIO-RK Introduction and Hands-on Training
Wednesday, May 31st, 2017 in Heidelberg
Target audience:
People interested in systems biology or biochemistry
Learning goals:
- Introduction to the biochemical reaction kinetics database SABIO-RK
- Learning and working with the tools of the database
Hands-on training:
- SABIO-RK web interface
- Export functionalities
- SABIO-RK web services
Prerequisites:
- Basic knowledge and interest in biochemistry or enzymology
- It is recommended to bring your own laptop
The participation is free of charge but registration is required until May 24th.
Please send an email to: maja.rey@h-its.org
Certificate of attendance can be issued.
